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1

Viruses manipulate the marine environment

Rohwer, Forest, Thurber, Rebecca Vega

Journal:

Year:

2009

Language:

english

File:

PDF, 2.32 MB

english, 2009

2

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

Langille, Morgan G I, Zaneveld, Jesse, Caporaso, J Gregory, McDonald, Daniel, Knights, Dan, Reyes, Joshua A, Clemente, Jose C, Burkepile, Deron E, Vega Thurber, Rebecca L, Knight, Rob, Beiko, Robert G

Journal:

Nature Biotechnology

Year:

2013

Language:

english

File:

PDF, 1.44 MB

english, 2013

3

Phage-bacteria network analysis and its implication for the understanding of coral disease

Soffer, Nitzan, Zaneveld, Jesse, Vega Thurber, Rebecca

Journal:

Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 648 KB

english, 2015

4

A novel sister clade to the enterobacteria microviruses (family M icroviridae ) identified in methane seep sediments

Bryson, Samuel Joseph, Thurber, Andrew R., Correa, Adrienne M. S., Orphan, Victoria J., Vega Thurber, Rebecca

Journal:

Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 1.21 MB

english, 2015

5

Stress and stability: applying the Anna Karenina principle to animal microbiomes

Zaneveld, Jesse R., McMinds, Ryan, Vega Thurber, Rebecca

Journal:

Nature Microbiology

Year:

2017

Language:

english

File:

PDF, 537 KB

english, 2017

6

Increased diversity and concordant shifts in community structure of coralâassociated Symbiodiniaceae and bacteria subjected to chronic human disturbance

Claar, Danielle C., McDevittâIrwin, Jamie M., Garren, Melissa, Vega Thurber, Rebecca, Gates, Ruth D., Baum, Julia K.

Journal:

Molecular Ecology

Year:

2020

File:

PDF, 16.97 MB

2020

7

Survival and settlement success of coral planulae: independent and synergistic effects of macroalgae and microbes

M. J. A. Vermeij, J. E. Smith, C. M. Smith, R. Vega Thurber, S. A. Sandin

Journal:

Year:

2009

Language:

english

File:

PDF, 470 KB

english, 2009

8

Metagenomic signatures of 86 microbial and viral metagenomes

Dana Willner, Rebecca Vega Thurber, Forest Rohwer

Journal:

Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 1.45 MB

english, 2009

9

Metagenomic analysis of stressed coral holobionts

Rebecca Vega Thurber, Dana Willner-Hall, Beltran Rodriguez-Mueller, Christelle Desnues, Robert A. Edwards, Florent Angly, Elizabeth Dinsdale, Linda Kelly, Forest Rohwer

Journal:

Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 685 KB

english, 2009

10

Viruses of reef-building scleractinian corals

Rebecca L. Vega Thurber, Adrienne M.S. Correa

Journal:

Journal of Experimental Marine Biology and Ecology

Year:

2011

Language:

english

File:

PDF, 957 KB

english, 2011

11

The sea urchin embryo as a model for studying efflux transporters: Roles and energy cost

David Epel, Bryan Cole, Amro Hamdoun, Rebecca Vega Thurber

Journal:

Marine Environmental Research

Year:

2006

Language:

english

File:

PDF, 91 KB

english, 2006

12

Current insights into phage biodiversity and biogeography

Rebecca Vega Thurber

Journal:

Current Opinion in Microbiology

Year:

2009

Language:

english

File:

PDF, 189 KB

english, 2009

13

The future of coral reefs: a microbial perspective

Tracy D. Ainsworth, Rebecca Vega Thurber, Ruth D. Gates

Journal:

Trends in Ecology & Evolution

Year:

2010

Language:

english

File:

PDF, 598 KB

english, 2010

14

Apoptosis in early development of the sea urchin, Strongylocentrotus purpuratus

Rebecca Vega Thurber, David Epel

Journal:

Developmental Biology

Year:

2007

Language:

english

File:

PDF, 2.03 MB

english, 2007

15

Potential role of viruses in white plague coral disease

Soffer, Nitzan, Brandt, Marilyn E, Correa, Adrienne MS, Smith, Tyler B, Thurber, Rebecca Vega

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.20 MB

english, 2014

16

Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching

Vega Thurber, Rebecca L., Burkepile, Deron E., Fuchs, Corinne, Shantz, Andrew A., McMinds, Ryan, Zaneveld, Jesse R.

Journal:

Global Change Biology

Year:

2014

Language:

english

File:

PDF, 503 KB

english, 2014

17

Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa

Vega Thurber, R. L., Barott, K. L., Hall, D., Liu, H., Rodriguez-Mueller, B., Desnues, C., Edwards, R. A., Haynes, M., Angly, F. E., Wegley, L., Rohwer, F. L.

Journal:

Proceedings of the National Academy of Sciences

Year:

2008

Language:

english

File:

PDF, 840 KB

english, 2008

18

Unprecedented evidence for high viral abundance and lytic activity in coral reef waters of the South Pacific Ocean

Payet, JÃ©rÃ´me P., McMinds, Ryan, Burkepile, Deron E., Vega Thurber, Rebecca L.

Journal:

Frontiers in Microbiology

Year:

2014

Language:

english

File:

PDF, 11.09 MB

english, 2014

19

Unique nucleocytoplasmic dsDNA and +ssRNA viruses are associated with the dinoflagellate endosymbionts of corals

Correa, Adrienne M S, Welsh, Rory M, Vega Thurber, Rebecca L

Journal:

The ISME Journal

Year:

2013

Language:

english

File:

PDF, 1.28 MB

english, 2013

20

The GAAS Metagenomic Tool and Its Estimations of Viral and Microbial Average Genome Size in Four Major Biomes

Angly, Florent E., Willner, Dana, Prieto-Davó, Alejandra, Edwards, Robert A., Schmieder, Robert, Vega-Thurber, Rebecca, Antonopoulos, Dionysios A., Barott, Katie, Cottrell, Matthew T., Desnues, Christ

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1018 KB

english, 2009

21

Bacterial predation in a marine host-associated microbiome

Welsh, Rory M, Zaneveld, Jesse R, Rosales, Stephanie M, Payet, Jérôme P, Burkepile, Deron E, Thurber, Rebecca Vega

Journal:

The ISME Journal

Year:

2015

Language:

english

File:

PDF, 1.14 MB

english, 2015

22

A Vicious Circle? Altered Carbon and Nutrient Cycling May Explain the Low Resilience of Caribbean Coral Reefs

Pawlik, Joseph R., Burkepile, Deron E., Thurber, Rebecca Vega

Journal:

Year:

2016

Language:

english

File:

PDF, 1015 KB

english, 2016

23

Sewage pollution: mitigation is key for coral reef stewardship

Wear, Stephanie L., Thurber, Rebecca Vega

Journal:

Annals of the New York Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 410 KB

english, 2015

24

Effects of predation and nutrient enrichment on the success and microbiome of a foundational coral

Shaver, Elizabeth C., Shantz, Andrew A., McMinds, Ryan, Burkepile, Deron E., Vega Thurber, Rebecca L., Silliman, Brian R.

Journal:

Year:

2017

Language:

english

File:

PDF, 304 KB

english, 2017

25

Virus–host interactions and their roles in coral reef health and disease

Thurber, Rebecca Vega, Payet, Jérôme P., Thurber, Andrew R., Correa, Adrienne M. S.

Journal:

Nature Reviews Microbiology

Year:

2017

Language:

english

File:

PDF, 936 KB

english, 2017

26

Macroalgae Decrease Growth and Alter Microbial Community Structure of the Reef-Building Coral, Porites astreoides

Vega Thurber, Rebecca, Burkepile, Deron E., Correa, Adrienne M. S., Thurber, Andrew R., Shantz, Andrew A., Welsh, Rory, Pritchard, Catharine, Rosales, Stephanie, Voolstra, Christian R.

Journal:

Year:

2012

Language:

english

File:

PDF, 587 KB

english, 2012

27

Correction: Brain Meta-Transcriptomics from Harbor Seals to Infer the Role of the Microbiome and Virome in a Stranding Event

Rosales, Stephanie M., Vega Thurber, Rebecca

Journal:

Year:

2015

Language:

english

File:

PDF, 114 KB

english, 2015

28

Responses of Coral-Associated Bacterial Communities to Local and Global Stressors

McDevitt-Irwin, Jamie M., Baum, Julia K., Garren, Melissa, Vega Thurber, Rebecca L.

Journal:

Frontiers in Marine Science

Year:

2017

Language:

english

File:

PDF, 3.33 MB

english, 2017

29

Corals and Their Microbiomes Are Differentially Affected by Exposure to Elevated Nutrients and a Natural Thermal Anomaly

Wang, Lu, Shantz, Andrew A., Payet, Jérôme P., Sharpton, Thomas J., Foster, Amelia, Burkepile, Deron E., Vega Thurber, Rebecca

Journal:

Frontiers in Marine Science

Year:

2018

Language:

english

File:

PDF, 2.17 MB

english, 2018

30

Two distinct microbial communities revealed in the sponge Cinachyrella

Cuvelier, Marie L., Blake, Emily, Mulheron, Rebecca, McCarthy, Peter J., Blackwelder, Patricia, Thurber, Rebecca L. Vega, Lopez, Jose V.

Journal:

Frontiers in Microbiology

Year:

2014

Language:

english

File:

PDF, 1.45 MB

english, 2014

31

Viral Outbreak in Corals Associated with an In Situ Bleaching Event: Atypical Herpes-Like Viruses and a New Megavirus Infecting Symbiodinium

Correa, Adrienne M. S., Ainsworth, Tracy D., Rosales, Stephanie M., Thurber, Andrew R., Butler, Christopher R., Vega Thurber, Rebecca L.

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 6.78 MB

english, 2016

32

Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny

Pollock, F. Joseph, McMinds, Ryan, Smith, Styles, Bourne, David G., Willis, Bette L., Medina, Mónica, Thurber, Rebecca Vega, Zaneveld, Jesse R.

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 2.62 MB

english, 2018

33

Multiple stressors interact primarily through antagonism to drive changes in the coral microbiome

Maher, Rebecca L., Rice, Mallory M., McMinds, Ryan, Burkepile, Deron E., Vega Thurber, Rebecca

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 1.49 MB

english, 2019

34

The Long Arm of Species Loss: How Will Defaunation Disrupt Ecosystems Down to the Microbial Scale?

Burkepile, Deron E, Thurber, Rebecca Vega

Journal:

Year:

2019

Language:

english

File:

PDF, 2.07 MB

english, 2019

35

Draft Genome Sequence of Phocine Herpesvirus 1 Isolated from the Brain of a Harbor Seal

Rosales, Stephanie M., Vega Thurber, Rebecca, Dennehy, John J.

Journal:

Microbiology Resource Announcements

Year:

2019

Language:

english

File:

PDF, 123 KB

english, 2019

36

Draft Genome Sequence of Phocine Herpesvirus 1 Isolated from the Brain of a Harbor Seal

Rosales, Stephanie M., Vega Thurber, Rebecca, Dennehy, John J.

Journal:

Microbiology Resource Announcements

Year:

2019

File:

PDF, 123 KB

2019

37

Parrotfish predation drives distinct microbial communities in reef-building corals

Ezzat, LeÃ¯la, Lamy, Thomas, Maher, Rebecca L., Munsterman, Katrina S., Landfield, Kaitlyn M., Schmeltzer, Emily R., Clements, Cody S., Vega Thurber, Rebecca L., Burkepile, Deron E.

Journal:

Animal Microbiome

Year:

2020

File:

PDF, 5.51 MB

2020

38

Coral-Associated Viral Assemblages From the Central Red Sea Align With Host Species and Contribute to Holobiont Genetic Diversity

CÃ¡rdenas, Anny, Ye, Jin, Ziegler, Maren, Payet, JÃ©rÃ´me P., McMinds, Ryan, Vega Thurber, Rebecca, Voolstra, Christian R.

Journal:

Frontiers in Microbiology

Year:

2020

File:

PDF, 2.53 MB

2020

39

Nutrient Pollution and Predation Differentially Affect Innate Immune Pathways in the Coral Porites porites

Dougan, Katherine E., Ladd, Mark C., Fuchs, Corinne, Vega Thurber, Rebecca, Burkepile, Deron E., Rodriguez-Lanetty, Mauricio

Journal:

Frontiers in Marine Science

Year:

2020

File:

PDF, 937 KB

2020

40

Coral Bleaching Phenotypes Associated With Differential Abundances of Nucleocytoplasmic Large DNA Viruses

Messyasz, Adriana, Rosales, Stephanie M., Mueller, Ryan S., Sawyer, Teresa, Correa, Adrienne M. S., Thurber, Andrew R., Vega Thurber, Rebecca

Journal:

Frontiers in Marine Science

Year:

2020

File:

PDF, 8.48 MB

2020

41

Coral Microbiomes Demonstrate Flexibility and Resilience Through a Reduction in Community Diversity Following a Thermal Stress Event

Maher, Rebecca L., Schmeltzer, Emily R., Meiling, Sonora, McMinds, Ryan, Ezzat, LeÃ¯la, Shantz, Andrew A., Adam, Thomas C., Schmitt, Russell J., Holbrook, Sally J., Burkepile, Deron E., Vega Thurber,

Journal:

Frontiers in Ecology and Evolution

Year:

2020

File:

PDF, 3.42 MB

2020

42

Increasing comparability among coral bleaching experiments

Grottoli, A.G., Toonen, R.J., van Woesik, R., Vega Thurber, R., Warner, M.E., McLachlan, R.H., Price, J.T., Bahr, K.D., Baums, I.B., Castillo, K., Coffroth, M.A., Cunning, R., Dobson, K., Donahue, M.,

Journal:

Ecological Applications

Year:

2020

File:

PDF, 17.97 MB

2020

43

Deciphering Coral Disease Dynamics: Integrating Host, Microbiome, and the Changing Environment

Vega Thurber, Rebecca, Mydlarz, Laura D., Brandt, Marilyn, Harvell, Drew, Weil, Ernesto, Raymundo, Laurie, Willis, Bette L., Langevin, Stan, Tracy, Allison M., Littman, Raechel, Kemp, Keri M., Dawkins

Journal:

Frontiers in Ecology and Evolution

Year:

2020

File:

PDF, 1.17 MB

2020